freebayes
Software Description
From the FreeBayes Git repository : FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
Info
Module Name
freebayes
Last Updated On
08/29/2023
Support Level
Primary Support
Software Access Level
Open Access
Home Page
Documentation
Software Description
From the FreeBayes Git repository : FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
General Linux
To load this module for use in a Linux environment, you can run the command:
module load freebayes
Depending on where you are working, there may be more than one version of freebayes available. To see which modules are available for loading you can run:
module avail freebayes
Agate Modules
Default
20161103
Other Modules
1.3.7, 20140718, 20141219, 20161103, 20180409
Mangi Modules
Default
20161103
Other Modules
1.3.7, 20140718, 20141219, 20161103, 20180409
Mesabi Modules
Default
20161103
Other Modules
1.3.7, 20140718, 20141219, 20161103, 20180409