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MSI Exhibits at SC08

The University of Minnesota's Supercomputing Institute showcased the University's research efforts at this year's Supercomputing Conference held November 15-21, 2008 in Austin, TX. The SC Conference is the premier international conference for high performance computing (HPC), networking, storage...

UMII UMGC Analysis Pipelines

Custom analysis pipelines developed with support from the UMGC and UMII. Pipelines include RNA-Seq analysis, 16s amplicon sequence analysis, and whole-genome shotgun resequencing alignment and variant calling.


SW Documentation: 

Full documentation for the pipelines is available at this website:


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License Limits
Access Limitations: 
This software is available to any MSI user.
SW Category
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International HPC Summer School 2015

The sixth International Summer School on HPC Challenges in Computational Sciences is now accepting applications for this summer’s session, which will be held June 21-26, 2015, in Toronto, Canada. Graduate students and post-docs from Canada, Europe, Japan, and the U.S. are invited to apply. The...

Governance & Organization

The Minnesota Supercomputing Institute is a core research facility of the University within the Research Computing umbrella group of the Office of the Vice President for Research . This arrangement positions MSI to provide leadership in the development and support of large-scale computing and data...

MSI Research Exhibition 2017

Tuesday, April 25, 2017 12:00-4:00pm 4th and 5th Floors, Walter Library MSI will hold its annual Research Exhibition on Tuesday, April 25, 2017. The event will include a panel discussion about employment in fields using scientific computing, industry presentations about current and emerging...

8/13/13: Cray, Inc. Town Hall Meeting, August 20

As part of the selection process for the next HPC system at MSI, we have invited top high-performance computing vendors to present their high-performance computing portfolios and roadmaps to users in a Town Hall setting. We expect a 1-2 hour presentation from each vendor followed by an opportunity...

2017 MSI Research Exhibition

2017 MSI Research Exhibition
Tuesday, April 25, 2017
4th and 5th Floors, Walter Library

MSI will hold its annual Research Exhibition on Tuesday, April 25, 2017. Events include:

  • Judged poster session.
  • ...
Event date: 
Tuesday, April 25, 2017 - 12:00 to 16:00
Event location: 
4th and 5th floors, Walter Library

2018 MSI Research Exhibition

2018 MSI Research Exhibition
Tuesday, April 17, 2018
1st, 4th, and 5th Floors, Walter Library

MSI will hold its annual Research Exhibition on Tuesday, April 17, 2018. The event will include:

Event date: 
Tuesday, April 17, 2018 - 12:00 to 16:00
Event location: 
1st, 4th, and 5th floors, Walter Library

SU Allocations

SU Allocations What are SUs? Do I need SUs? How do I get SUs? How many SUs will I need? What if my group is running out of SUs before the end of the year? What are SUs? Service units (SUs) represent units of time on MSI’s HPC resources, and your MSI group must have an allocation of SUs in order to...

How do I manage my MSI account(s)?

myMSI Membership Manager The following account management functions are available through the the myMSI interface: Add user to group Edit existing user Remove user from a group Add user to group All new users must have a UMN Internet ID. For more information on getting a UMN Internet ID, see the...