Main navigation | Main content
University of Minnesota
http://www.umn.edu/
612-625-5000
Go to the U of M home page
  • One Stop
  • MyU : For Students, Faculty, and Staff
 

Minnesota Supercomputing Institute

 
System Status
Log into MSI
  • Getting Started
  • Help & Documentation
  • Services
  • Proposal Support
  • Systems
  • News & Events
  • Research @ MSI
  • About
  • Getting Started
  • Services
  • Systems
  • Research
  • Help & Documentation
  • News & Events
  • About
  • Proposal Support
  • System Status
  • Getting Started
    • Get Access to MSI
    • Quick Start Guides
    • MSI Tutorials
  • Help & Documentation
    • Software
    • Queues
    • MSI Tutorials
    • FAQ
    • Users Bulletin
  • Services
    • Interactive HPC
    • Consultation
    • Data Storage
    • Portals and Databases
    • MSI Beta
  • Proposal Support
  • Systems
    • HPC
    • Interactive HPC
    • Data Storage
    • Specialized Hardware
    • Computer & Visualization Labs
  • News & Events
    • MSI News
    • Events
  • Research @ MSI
    • MSI PIs
    • MSI Research
    • Research Spotlights DIgest
    • Acknowledgments
  • About
    • Director's Message
    • Our Experts
    • Governance
    • Policies
    • Proposal Support
    • Employment
    • Tours

Anaconda

Python is a high level programming language that aims to combine remarkable power with very clear syntax. Anaconda is a free cross-platform Python distribution from Continuum Analytics . It comes built in with various scientific Python packages such as NumPy, SciPy, Pandas, Matplotlib, Numba, etc.
Secondary Support
Available to anyone
HPC/Linux
Debugging and Performance, Data Visualization, Image Processing, Biomedical Imaging, Numerical Libraries, Optimization, Statistics

Tensorflow

From the Tensorflow website: TensorFlow is an open source software library for numerical computation using data flow graphs. Nodes in the graph represent mathematical operations, while the graph edges represent the multidimensional data arrays (tensors) communicated between them. TensorFlow was originally developed by researchers and engineers working on the Google Brain Team within Google's Machine Intelligence research organization for the purposes of conducting machine learning and deep neural networks research, but the system is general enough to be applicable in a wide variety of other...
Minimal Support
Available to anyone
HPC/Linux
Others

Caffe

From the Caffe website: Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is developed by Berkeley AI Research ( BAIR ) and by community contributors. Yangqing Jia created the project during his PhD at UC Berkeley. Caffe is released under the BSD 2-Clause license .
Minimal Support
Available to anyone
HPC/Linux
Data Mining

Pilon

From the Pilon documentation: "Pilon uses read alignment analysis to diagnose, report, and automatically improve de novo genome assemblies as well as call variants."
Minimal Support
Available to anyone
HPC/Linux
Genetics

Qiime2

QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline.
Primary Support
Available to anyone
HPC/Linux
Life Sciences, Biostatistics, Genetics, Others

Pages

  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
  • …
  • next ›
  • last »

Support Level

  • Primary Support (52) Apply Primary Support filter
  • Secondary Support (70) Apply Secondary Support filter
  • Minimal Support (215) Apply Minimal Support filter
  • Deprecated (3) Apply Deprecated filter

Access Level

  • Available to anyone (114) Apply Available to anyone filter
  • Available upon request (14) Apply Available upon request filter

Platform

  • Windows (48) Apply Windows filter
  • HPC/Linux (80) Apply HPC/Linux filter

Disciplines

  • 69 (7) Apply 69 filter
  • 74 (2) Apply 74 filter
  • 75 (5) Apply 75 filter
  • 80 (5) Apply 80 filter
  • 88 (3) Apply 88 filter
  • Development Tools (25) Apply Development Tools filter
    • Compilers and Message Passing Libraries (8) Apply Compilers and Message Passing Libraries filter
    • Debugging and Performance (10) Apply Debugging and Performance filter
  • Graphics and Visualization (45) Apply Graphics and Visualization filter
    • Animation (8) Apply Animation filter
    • Computational Geometry (8) Apply Computational Geometry filter
    • Data Visualization (24) Apply Data Visualization filter
    • Image Processing (18) Apply Image Processing filter
    • Video Editing (5) Apply Video Editing filter
  • Others (29) Apply Others filter
    • Email (1) Apply Email filter
  • Engineering (12) Apply Engineering filter
    • Computer Aided Engineering (5) Apply Computer Aided Engineering filter
    • Electrical Engineering (2) Apply Electrical Engineering filter
    • Fluid Dynamics (2) Apply Fluid Dynamics filter
    • Material Science (3) Apply Material Science filter
    • Structural Engineering (1) Apply Structural Engineering filter
  • Life Sciences (215) Apply Life Sciences filter
    • Biomedical Imaging (8) Apply Biomedical Imaging filter
    • Biostatistics (23) Apply Biostatistics filter
    • Data Mining (11) Apply Data Mining filter
    • Drug Discovery (16) Apply Drug Discovery filter
    • Genetics (144) Apply Genetics filter
    • Microarray Data Analysis (4) Apply Microarray Data Analysis filter
    • Structural Biology (25) Apply Structural Biology filter
    • Pathway Analysis (4) Apply Pathway Analysis filter
    • Proteomics (11) Apply Proteomics filter
  • Chemical and Physical Sciences (52) Apply Chemical and Physical Sciences filter
    • Electronic Structure (18) Apply Electronic Structure filter
    • Molecular Modeling and Simulation (29) Apply Molecular Modeling and Simulation filter
    • Spectroscopy (10) Apply Spectroscopy filter
    • Synthesis and Design (4) Apply Synthesis and Design filter
  • Mathematics (38) Apply Mathematics filter
    • Comprehensive Math (3) Apply Comprehensive Math filter
    • Numerical Libraries (22) Apply Numerical Libraries filter
    • Optimization (6) Apply Optimization filter
    • Statistics (16) Apply Statistics filter
  • Database Systems (7) Apply Database Systems filter
    • Data Management Systems (1) Apply Data Management Systems filter
    • Database (4) Apply Database filter

© 2015 Regents of the University of Minnesota. All rights reserved. The University of Minnesota is an equal opportunity educator and employer. Privacy Statement