Gaussian performs semiempirical and ab initio molecular orbital (MO), density functional, and molecular mechanics calculations. To use this program at MSI, please send a request to firstname.lastname@example.org and ask to be added to the Gaussian group. To use Gaussian 09, you need to be a researcher at the Twin Cities campus. MSI is in the process of deprecating some older, unused versions of Gaussian. Below is a list of modules that are slated for removal, and for each, a corresponding supported module. If you are using one of the deprecated modules, please transition to the listed supported module...
R is a language and environment for statistical computing and graphics. R provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques, and is highly extensible. The S language is often the vehicle of choice for research in statistical methodology, and R provides an Open Source route to participation in that activity.
ClustalW is a general purpose multiple alignment program for DNA or proteins. ClustalX is a graphical user interface for the ClustalW multiple sequence alignment program.
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline.
Python is a high level programming language that aims to combine remarkable power with very clear syntax. Its success in these areas has led to strong adoption by the scientific community, resulting in numerous math, physics, chemistry, and biology libraries being contributed from the community of users.