Deprecated

Spotfire

TIBCO Spotfire is no longer offered at MSI

The license to Spotfire expired Jan 1, 2016 and will not renewed.

 

Goby (DISABLED - will be removed on 12/20/17)

Note: Due to lack of use, this software module has been disabled and will be removed from MSI systems on 12/20/17. If you need this software, please contact help@msi.umn.edu.

 

Goby is a next-gen gene sequence data management framework designed to facilitate the implementation of efficient data analysis pipelines.

RNAz (DISABLED - will be removed 9/28/2017)

NOTE: Due to lack of use, this software module has been disabled and will be removed from MSI systems on 9/28/2017. If you need this software, please contact help@msi.umn.edu.

 

"RNAz is a program for predicting structurally conserved and thermodynamically stable RNA secondary structures in multiple sequence alignments. It can be used in genome wide screens to detect functional RNA structures, as found in noncoding RNAs and cis-acting regulatory elements of mRNAs."

LocaRNA (DISABLED - will be removed on 12/20/17)

Note: Due to lack of use, this software module has been disabled and will be removed from MSI systems on 12/20/17. If you need this software, please contact help@msi.umn.edu.

 

LocaRNA is a package of tools for producing fast and high-quality pairwise and multiple alignment of RNA sequences. It uses a complex RNA energy model for simultaneous folding and sequence/structure alignment of the RNAs. LocARNA performs global, sequence local, or even structurally local alignment of the molecules.

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