Where can I use dbGaP data?

You can run analysis on dbGaP data at MSI, but you must have an active Data Access Plan with the NIH and request a special project (help@msi.umn.edu).

NCBI's webpage has information about how to request access to dbGaP data.

dbGaP was previously stored in /panfs/single_copy. It now data goes onto Stratus (s3cache and s3secure) or as a special project on tier 1.

If you would like to analyze dbGaP data on MSI, please email help@msi.umn.edu.