Roche/454 Genome Sequencer FLX Assembler, Mapper, and Amplicon Variant Analyzer

The 454/Roche Genome Sequencer FLX System software contains tools for data processing and analysis associated with GS FLX instrument. It contains:
  • GS De Novo Assembler Software
  • GS Reference Mapper Software
  • GS Amplicon Variant Analyzer Software
  • GS Run Browser Software
To run this software interactively in a Linux environment run the commands:
module load 454

454 also provides command line programs, eg.,

runAssembly -o outdir (sfffile datadir)
Other utilities are available in the directory
where VER is the version of 454 you  are using.  For documentation, refer the 454 homepage.
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