BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
To run this software interactively in a Linux environment run the commands:
module load bfast bfast command [options]
manual can be found at:
Where VER is the current version of bfast that you're interested in.
Home Page: http://sourceforge.net/projects/bfast Setting Up Your Environment