ABySS - Assembly By Short Sequence

Search Software

ABySS is a de novo, possible parallel paired-end sequence assembler that is designed for short reads.

Home Page

http://www.bcgsc.ca/platform/bioinfo/software/abyss

SW Documentation: 

To run this software in a Linux environment run the commands:

module load abyss
ABYSS

Several versions of Matlab are available, but the versions may be different on different platforms.To list all versions of Matlab available on the machine, type

module avail abyss

When running on the elmob nodes use this module instead:

module load abyss/1.3.6
ABYSS

Short Name: 
ABySS
SW Module: 
abyss
Service Level: 
Minimal
SW Category