ABySS

Software Summary

Mesabi

Default Module: 

2.0.2

Other Modules Available: 

1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2, 2.1.5

Last Updated On: 

Wednesday, December 12, 2018

Mesabi K40

Default Module: 

2.0.2
Other Modules Available: 

1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2, 2.1.5

Last Updated On: 

Wednesday, December 12, 2018

Mangi

Default Module: 
2.0.2
Other Modules Available: 

1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2, 2.1.5

Last Updated On: 

Wednesday, December 12, 2018

Mangi v100

Default Module: 

2.0.2
Other Modules Available: 

1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2, 2.1.5

Last Updated On: 

Wednesday, December 12, 2018

NICE

Default Module: 

2.0.2

Other Versions Available: 

1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2

Last Updated On: 

Thursday, August 2, 2018

Last Updated On: 

Wednesday, December 12, 2018

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Software Categories: 
Genetics
Software Description

ABySS is a de novo, parallel, paired-end genomic sequence assembler that is designed for short reads. The single-processor version is useful for assembling genomes up to 100 Mbases in size. The parallel version is implemented using MPI and is capable of assembling larger genomes. To assemble transcriptome data, consider the related program trans-abyss.

Homepage: http://www.bcgsc.ca/platform/bioinfo/software/abyss

Software Documentation

Software Documentation Tabs