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BioPerl is a toolkit of Perl modules useful for building bioinformatics programs in perl. The collection of modules in bioperl makes it easy to develop bioinformatics applications for sequences analysis, as well as for creating graphical interfaces (bioperl-gui), persistent storage in RDMBS (bioperl-db), and running and parsing the results from hundreds of bioinformatics applications (bioperl-run).
module load bioperl
#!/usr/bin/perl -w use Bio::Seq