blat

Genetics

Software Description

BLAT, the BLAST-like alignment tool, is a DNA/Protein Sequence Analysis program. It is designed to quickly find sequences of 95% and greater similarity of length 40 bases or more.


Info

Module Name

blat

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://genome.ucsc.edu/cgi-bin/hgBlat?command=start

Documentation

Software Description

BLAT, the BLAST-like alignment tool, is a DNA/Protein Sequence Analysis program. It is designed to quickly find sequences of 95% and greater similarity of length 40 bases or more.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load blat

Depending on where you are working, there may be more than one version of blat available. To see which modules are available for loading you can run:

module avail blat

Agate Modules

Default

35

Other Modules

34, 35

Mangi Modules

Default

35

Other Modules

34, 35

Mesabi Modules

Default

35

Other Modules

34, 35