Blat

Search Software

BLAT, the BLAST-like alignment tool, is a DNA/Protein Sequence Analysis program. It is designed to quickly find sequences of 95% and greater similarity of length 40 bases or more.
 
SW Documentation: 
To run this software interactively in a Linux environment run the commands:
module load blat
blat <database> <query> <output.psl>
For documentation, run the blat command without any parameters, or see the BLAT homepage.
 
Additonal Information

 

Short Name: 
blat-sequence
SW Module: 
blat
Service Level: 
Ancillary
SW Category: