Bowtie

Software Summary

Mesabi

Default Module: 

2.3.4.1

Other Modules Available: 

1.1.2, 2.2.2, 2.2.4, 2.3.1, 2.3.2, 2.1.0, 2.3.4.1, 2.3.0

Last Updated On: 

Monday, August 6, 2018

Mesabi K40

Default Module: 

2.3.4.1
Other Modules Available: 

1.1.2, 2.2.2, 2.2.4, 2.3.1, 2.3.2, 2.1.0, 2.3.4.1, 2.3.0

Last Updated On: 

Monday, August 6, 2018

Mangi

Default Module: 
2.3.4.1
Other Modules Available: 

1.1.2, 2.2.2, 2.2.4, 2.3.1, 2.3.2, 2.1.0, 2.3.4.1, 2.3.0

Last Updated On: 

Monday, August 6, 2018

Mangi v100

Default Module: 

2.3.4.1
Other Modules Available: 

1.1.2, 2.2.2, 2.2.4, 2.3.1, 2.3.2, 2.1.0, 2.3.4.1, 2.3.0

Last Updated On: 

Monday, August 6, 2018

NICE

Default Module: 

2.3.4.1

Other Versions Available: 

1.1.2, 2.2.2, 2.2.4, 2.3.1, 2.3.2, 2.1.0, 2.3.4.1, 2.3.0

Last Updated On: 

Monday, August 6, 2018

Last Updated On: 

Monday, August 6, 2018

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Software Categories: 
Genetics
Software Description

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).

Software Documentation

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