Search Software

  • Bioconductor is an open source and open development software project to provide tools for the analysis and comprehension of genomic data.

  • Cytoscape is an open source bioinformatics software platform for visualizing complex networks and integrating with gene expression profiles and other state data.

  • GOTreePlus is an interactive gene ontology visualization tool that can superimpose annotation information over gene ontology structures. GOTreePlus can facilitate the identification of important GO terms while visualizing them in the gene ontology structure.

  • Ingenuity Pathways Analysis (IPA) is a software and database search tool for finding functions and pathways for specific biological states.

  • PathwayStudio is the upgrade version of PathwayAssist software. It can build and examine biological association networks, including traditional pathways. One can see protein, small molecule and cellular processes all together for a more complete systems biology network view.