CEAS

Software Summary

Mesabi

Default Module: 

1.0.2

Other Modules Available: 

1.0.2

Last Updated On: 

Thursday, August 23, 2018

Mesabi K40

Default Module: 

1.0.2
Other Modules Available: 

1.0.2

Last Updated On: 

Thursday, August 23, 2018

Mangi

Default Module: 
1.0.2
Other Modules Available: 

1.0.2

Last Updated On: 

Thursday, August 23, 2018

Mangi v100

Default Module: 

1.0.2
Other Modules Available: 

1.0.2

Last Updated On: 

Thursday, August 23, 2018

NICE

Default Module: 

1.0.2

Other Versions Available: 

1.0.2

Last Updated On: 

Thursday, August 23, 2018

Last Updated On: 

Thursday, August 23, 2018

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Software Categories: 
Genetics
Software Description

From the web site:

We present a tool designed to characterize genome-wide protein-DNA interaction patterns from ChIP-chip and ChIP-Seq of both sharp and broad binding factors. As a stand-alone extension of our web application CEAS (Cis-regulatory Element Annotation System), it provides statistics on ChIP enrichment at important genome features such as specific chromosome, promoters, gene bodies, or exons, and infers genes most likely to be regulated by a binding factor. CEAS also enables biologists to visualize the average ChIP enrichment signals over specific genomic features, allowing continuous and broad ChIP enrichment to be perceived which might be too subtle to detect from ChIP peaks alone.

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