cytoscape

Pathway Analysis

Software Description

Cytoscape is an open source bioinformatics software platform for visualizing complex networks and integrating with gene expression profiles and other state data.


Info

Module Name

cytoscape

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://www.cytoscape.org/

Documentation

Software Description

Cytoscape is an open source bioinformatics software platform for visualizing complex networks and integrating with gene expression profiles and other state data.

Citrix

To run this software under Windows , connect using instruction provided in our Windows systems page .  Once logged in, navigate to

Start > All Programs > Cytoscape > Cytoscape

You can find documentation in the Cytoscape home page. Additional Information

Cytoscape Homepage

User Documentation

General Linux

To load this module for use in a Linux environment, you can run the command:

module load cytoscape

Depending on where you are working, there may be more than one version of cytoscape available. To see which modules are available for loading you can run:

module avail cytoscape

Agate Modules

Default

2.8.3

Other Modules

2.8.3, 3.5.1

Mangi Modules

Default

2.8.3

Other Modules

2.8.3, 3.5.1

Mesabi Modules

Default

2.8.3

Other Modules

2.8.3, 3.5.1