ea-utils

ea-utils provides command-line tools for processing biological sequencing data using methods such as barcode demultiplexing, adapter trimming, etc.  It was primarily written to support an Illumina based pipeline - but should work with any FASTQs.

To run this software interactively in a Linux environment run the commands:

module load ea-utils
fastq-clipper
     
     or

fastq-join
     or
fastq-mcf
     or
fastq-multx
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