FreeSurfer

FreeSurfer is a set of automated tools for reconstruction of the brain’s cortical surface from structural MRI data, and overlay of functional MRI data onto the reconstructed surface.

To access Free Surfer, in a linux environment, either interactively or in a pbs file, run the following commands:

module load freesurfer
freesurfer
For documentation on Free Surfer, visit the page http://surfer.nmr.mgh.harvard.edu/fswiki
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