GraphClust

Search Software

GraphClust can be used for structural clustering of RNA sequences. Especially it can be used for clustering of very large dataset with thousands of RNAs.

http://www.bioinf.uni-freiburg.de/Software/GraphClust/

SW Documentation: 

To run this software in a Linux environment run the commands:

module load viennarna rnashapes rnaz infernal cmfinder locarna octave R ncbi_blast graphclust
MASTER_GraphClust.pl
Short Name: 
graphclust
SW Module: 
graphclust
Service Level: 
Minimal