Minnesota Supercomputing Institute
2.2, 2.2.6_mpi, 2.2.6_smp
Thursday, August 2, 2018
HyPhy stands for hypothesis testing using phylogenies. It is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It also features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface) and it can be compiled as a shared library and called from other programming environments such as Python or R.
To launch this software interactively in a Linux environment run the commands:
module load hyphy
It requires a batch file to run the job. For more detailed instruction on the program, please refer to: