HyPhy

Software Summary

Mesabi

Default Module: 

2.2.6_smp

Other Modules Available: 

2.2, 2.2.6_mpi, 2.2.6_smp

Last Updated On: 

Thursday, August 2, 2018

Mesabi K40

Default Module: 

2.2.6_smp
Other Modules Available: 

2.2, 2.2.6_mpi, 2.2.6_smp

Last Updated On: 

Thursday, August 2, 2018

Mangi

Default Module: 
2.2.6_smp
Other Modules Available: 

2.2, 2.2.6_mpi, 2.2.6_smp

Last Updated On: 

Thursday, August 2, 2018

Mangi v100

Default Module: 

2.2.6_smp
Other Modules Available: 

2.2, 2.2.6_mpi, 2.2.6_smp

Last Updated On: 

Thursday, August 2, 2018

NICE

Default Module: 

2.2.6_smp

Other Versions Available: 

2.2, 2.2.6_mpi, 2.2.6_smp

Last Updated On: 

Thursday, August 2, 2018

Last Updated On: 

Thursday, August 2, 2018

Support Level: 
Primary Support
Software Access Level: 
Open Access
Software Categories: 
Genetics
Software Description

HyPhy stands for hypothesis testing using phylogenies. It is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It also features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface) and it can be compiled as a shared library and called from other programming environments such as Python or R.

Software Documentation

Software Documentation Tabs