Note: Due to lack of use, this software module has been disabled and will be removed from MSI systems on 12/20/17. If you need this software, please contact email@example.com.
LocaRNA is a package of tools for producing fast and high-quality pairwise and multiple alignment of RNA sequences. It uses a complex RNA energy model for simultaneous folding and sequence/structure alignment of the RNAs. LocARNA performs global, sequence local, or even structurally local alignment of the molecules.
To run this software interactively in a Linux environment run the commands:
module load viennarna locarna locarna