LocaRNA

Search Software

"LocaRNA is a package of tools for producing fast and high-quality pairwise and multiple alignment of RNA sequences. It uses a complex RNA energy model for simultaneous folding and sequence/structure alignment of the RNAs. LocARNA performs global, sequence local, or even structurally local alignment of the molecules."

 

SW Documentation: 

To run this software interactively in a Linux environment run the commands:

module load viennarna locarna
locarna

http://www.bioinf.uni-freiburg.de/Software/LocARNA/

 
Short Name: 
locarna
SW Module: 
locarna
Service Level: 
Minimal