Minnesota Supercomputing Institute
0.24.post1
Thursday, April 22, 2021
NanoCount estimates transcripts abundance from Oxford Nanopore direct-RNA sequencing datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads.
NanoCount can be loaded for use in an interactive Linux environment via:
module load nanocount NanoCount