NanoCount

Software Summary

Mesabi

Default Module: 

0.24.post1

Other Modules Available: 

0.24.post1

Last Updated On: 

Thursday, April 22, 2021

Mesabi K40

Default Module: 

0.24.post1
Other Modules Available: 

0.24.post1

Last Updated On: 

Thursday, April 22, 2021

Mangi

Default Module: 
0.24.post1
Other Modules Available: 

0.24.post1

Last Updated On: 

Thursday, April 22, 2021

Mangi v100

Default Module: 

0.24.post1
Other Modules Available: 

0.24.post1

Last Updated On: 

Thursday, April 22, 2021

NICE

Default Module: 

0.24.post1

Other Versions Available: 

0.24.post1

Last Updated On: 

Thursday, April 22, 2021

Last Updated On: 

Thursday, April 22, 2021

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Software Categories: 
Biostatistics
Genetics
Software Description

NanoCount estimates transcripts abundance from Oxford Nanopore direct-RNA sequencing datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads.

Software Documentation

Software Documentation Tabs