Oases

Search Software

Oases is a de novo transcriptome assembler designed to produce transcripts from short read sequencing technologies, such as Illumina, SOLiD, or 454 in the absence of any genomic assembly. It was developed by Marcel Schulz (MPI for Molecular Genomics) and Daniel Zerbino (previously at the European Bioinformatics Institute (EMBL-EBI), now at UC Santa Cruz).

SW Documentation: 

To run this software interactively in a Linux environment run the commands:

module load oases
oases
Short Name: 
oases
SW Module: 
oases
Service Level: 
Minimal
SW Category: