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PyMOL is a Python-enhanced molecular graphics program. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. It also has a number of third party plugins available. Currently installed third party plugins at MSI are: Caver v2, Mole, and EMovie.

SW Documentation: 

To run this software interactively in a Linux environment use the commands:

module load pymol

To run this software under Windows, connect using instructions provided on our Windows systems page. Once logged in, navigate to :

Start > All Programs > PyMOL

To install PyMOL on your own system contact to receive the PyMOL credentials.

Additional Information
PyMOL Wiki


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License Limits
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This software is available to any MSI user.
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