quake

Genetics

Software Description

Quake is a package to correct substitution sequencing errors in experiments with deep coverage (e.g. >15X), specifically intended for Illumina sequencing reads.


Info

Module Name

quake

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://www.cbcb.umd.edu/software/quake/

Documentation

Software Description

Quake is a package to correct substitution sequencing errors in experiments with deep coverage (e.g. >15X), specifically intended for Illumina sequencing reads.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load quake

Depending on where you are working, there may be more than one version of quake available. To see which modules are available for loading you can run:

module avail quake

Agate Modules

Default

0.3.5

Other Modules

0.3.5, 0.3.5_read300

Mangi Modules

Default

0.3.5

Other Modules

0.3.5, 0.3.5_read300

Mesabi Modules

Default

0.3.5

Other Modules

0.3.5, 0.3.5_read300