RISS-tools

Search Software

A collection of utility scripts developed by the RISS group at MSI, mainly geared towards next-generation sequence data.

SW Documentation: 

To load this software in a Linux environment run the command:

module load riss_util

Available programs:

bamflags.pl

convert_casava_18

extract_fasta.pl

extract_fastq.pl

fastq-species-blast.pl

pe-sync-2-files.pl

redup.pl

resync.pl

tophatstatsPE.pl

Run a progam without supplying any options for usage information. Use perldoc to view extended documentation for perl scripts (scripts ending in .pl). For example: perldoc redup.pl

Short Name: 
riss-tools
SW Module: 
riss_util
Service Level: 
Minimal
SW Category: