Minnesota Supercomputing Institute
With regards to the safety measures put in place by the university to mitigate the risks of the COVID-19 virus, at this time all MSI systems will remain operational and can be accessed remotely as usual. The only planned outages concern our in-person Helpdesk and tutorials. More information, as well as alternative remote support options, can be found at MSI COVID-19 Continuity Plan
Thursday, June 28, 2018
RNAmmer is software for predicting ribosomal RNA in full gene sequences. To use this program at MSI, please send a a request to firstname.lastname@example.org and ask to be added to the RNAmmer group. The use of RNAmmer at MSI is limited to academic researchers.
To run this software interactively in a linux environment run the commands:
module load rnammer
rnammer [options] < [input file]
If you encounter the error: "rnammer: Command not found" or something similar, you are probably not part of the RNAmmer group. Please contact email@example.com with a request to be added.