SAM tools

Software Summary

Mesabi

Default Module: 

1.9

Other Modules Available: 

1.3_gcc-4.9.2_haswell, 1.5_gcc-7.2.0_haswell, 1.7_gcc-7.2.0_haswell, 1.9, 1.9, 1.10, 1.9, 1.5, 1.6, 1.7

Last Updated On: 

Tuesday, February 11, 2020

Mesabi K40

Default Module: 

1.9
Other Modules Available: 

1.3_gcc-4.9.2_haswell, 1.5_gcc-7.2.0_haswell, 1.7_gcc-7.2.0_haswell, 1.9, 1.9, 1.10, 1.9, 1.5, 1.6, 1.7

Last Updated On: 

Tuesday, February 11, 2020

Mangi

Default Module: 
1.10
Other Modules Available: 

1.9, 1.10, 1.9, 1.5, 1.6, 1.7

Last Updated On: 

Tuesday, January 14, 2020

Mangi v100

Default Module: 

1.10
Other Modules Available: 

1.9, 1.10, 1.9, 1.5, 1.6, 1.7

Last Updated On: 

Tuesday, January 14, 2020

NICE

Default Module: 

1.9

Other Versions Available: 

1.9, 1.5, 1.6, 1.7

Last Updated On: 

Thursday, December 20, 2018

Last Updated On: 

Tuesday, February 11, 2020

Support Level: 
Primary Support
Software Access Level: 
Open Access
Software Categories: 
Genetics
Software Description

SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAM tools provide efficient utilities for manipulating alignments in the SAM and Bam formats.

Software Documentation

Software Documentation Tabs