SAM tools

Search Software

SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAM tools provide efficient utilities for manipulating alignments in the SAM and Bam formats.

SW Documentation: 

To run this software interactively in a Linux environment run the commands:

module load samtools

samtools

Additional Information

 

Short Name: 
samtools
SW Module: 
samtools
Service Level: 
Primary
SW Category: