Minnesota Supercomputing Institute
With regards to the safety measures put in place by the university to mitigate the risks of the COVID-19 virus, at this time all MSI systems will remain operational and can be accessed remotely as usual. The only planned outages concern our in-person Helpdesk and tutorials. More information, as well as alternative remote support options, can be found at MSI COVID-19 Continuity Plan
4.1.0, 4.4.0, 4.5.0-1, r24684
Wednesday, December 7, 2016
Slicer, or 3D Slicer, is a free, open source software package for visualization and image analysis. It includes tools for segmentation, rendering, registration of MRI, CT, US, nuclear medicine, and microscopy images.
To run this software interactively in a Linux environment run the commands (NOTE: second command is case-sensitive):
module load slicer3d
The documentation can be found at the website http://www.slicer.org/slicerWiki/index.php/Documentation