Minnesota Supercomputing Institute
With regards to the safety measures put in place by the university to mitigate the risks of the COVID-19 virus, at this time all MSI systems will remain operational and can be accessed remotely as usual. The only planned outages concern our in-person Helpdesk and tutorials. More information, as well as alternative remote support options, can be found at MSI COVID-19 Continuity Plan
Thursday, April 30, 2020
SPAdes (St. Petersburg genome assembler) is an assembly toolkit with a variety of assembly pipelines.
Multiple versions are available. Please note using the command:
module avail spades
To load this software interactively in a Linux environment, run the command:
module load spades
For documentation on using SPAdes, refer to the SPAdes website.