structure

Biostatistics

Software Description

The program structure is a free software package for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs.


Info

Module Name

structure

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

https://web.stanford.edu/group/pritchardlab/structure_software/release_versions/v2.3.4/html/structure.html

Documentation

Software Description

The program structure is a free software package for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs.

Citrix

To run this software under Windows, connect using instructions provided on our Windows systems page . Once logged in, navigate to:

Start > All Programs > Structure 2.3.4

General Linux

To load this module for use in a Linux environment, you can run the command:

module load structure

Depending on where you are working, there may be more than one version of structure available. To see which modules are available for loading you can run:

module avail structure

Agate Modules

Default

2.3.4-console

Other Modules

2.3.4-console-CentOS7, 2.3.3, 2.3.4-console

Mangi Modules

Default

2.3.4-console

Other Modules

2.3.4-console-CentOS7, 2.3.3, 2.3.4-console

Mesabi Modules

Default

2.3.4-console

Other Modules

2.3.4-console-CentOS7, 2.3.3, 2.3.4-console