Minnesota Supercomputing Institute
Thursday, July 2, 2020
TransDecoder is software for identifying candidate coding regions within transcript sequences, including those from de novo RNA-Seq transcript assembly via Trinity, or from RNA-Seq alignments to the genome using Tophat and Cufflinks.
To load this software for interactive use in a Linux environment run the command:
module load transdecoder/3.0.1
Several example use cases can be found in the the folder: