Velvet Sequence Assembler for Very Short Reads

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Velvet is a software for De Novo Short Read Assembly Using De Bruijn Graphs.It can be used for Solexa and 454 sequencing data assembly.

SW Documentation: 

To load this software in a Linux environment run the commands:

module load velvet

Package velvet contains two programs: velveth and velvetg. Velveth is the program that creates hash tables that will be used by velvetg to assemble the sequences.

To run this software run the commands:

velveth 

  or 

velvetg

HomePage:http://www.ebi.ac.uk/~zerbino/velvet/

 

Short Name: 
velvet
SW Module: 
velvet
Service Level: 
Minimal
SW Category: