Minnesota Supercomputing Institute
1.2.03, 1.2.08, 1.2.10
Wednesday, April 12, 2017
Velvet is a software for De Novo Short Read Assembly Using De Bruijn Graphs.It can be used for Solexa and 454 sequencing data assembly.
To load this software in a Linux environment run the command(s):
module load velvet
Package velvet contains two programs: velveth and velvetg. Velveth is the program that creates hash tables that will be used by velvetg to assemble the sequences. To run this software run the command(s):
Home Page: http://www.ebi.ac.uk/~zerbino/velvet/