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Tutorial Details: Illumina Sequence Analyzer III: Introduction to ChIP-seq

Date: Friday, March 11, 2011, 01:00 pm - 03:00 pm
Location: Room 138 Cargill
Instructor(s): Zheng Jin Tu, MSI

ChIP-Seq combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to identify the set of cis-acting targets for trans-acting DNA-associated proteins on a genome scale. It can be used to map global binding sites for any protein of interest.

This tutorial will review the technology of ChIP-seq and data analysis software, including the Galaxy framework implemented at the University of Minnesota. We will also briefly review bioinformatics tools for further downstream data analysis.

Level: Introductory
Prerequisites: None