All Tutorials

  • Tue Apr 9, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 10: GPGPU: Number Crunching in Your Graphics Card


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Apr 9, 1:00 pm - 3:00 pm
    575
    Walter Library

    Python is a general purpose programming language with a rich syntax and structure. You can learn to use Python and see almost immediate gains in productivity relative to programming with other languages. Python has many modules specializing in various topics of interest to the scientific community and is used as an interface for numerous scientific packages. This tutorial provides an introduction to Python. Simple and advanced data types, variable assignment, control structures, mathematical and logical operators, program input and output, and functional programming will be discussed.


  • Tue Mar 26, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 9: High Throughput Computing


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Mar 12, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 8: Multicore Madness


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Mar 5, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 7: Applications and Types of Parallelism


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Feb 26, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 6: Distributed Multiprocessing


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Feb 19, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 5: Shared Memory Multithreading


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Feb 19, 1:00 pm - 4:00 pm
    575
    Walter Library

    The tutorial will consist of lectures and hands-on exercises covering the following topics: MSI’s GPGPU resources, basics of GPU Computing with CUDA, and better use of memory hierarchy for performance enhancement.


  • Tue Feb 12, 2:00 pm - 3:15 pm
    138
    Cargill Building

    Supercomputing in Plain English: A High Performance Computing Workshop Series

    Session 4: Stupid Compiler Tricks


    This is a videoconference of a workshop being presented by OSCER.


    The OU Supercomputing Center for Education & Research (OSCER) is presenting a workshop series on Supercomputing in Plain English (SiPE). MSI is videoconferencing these sessions live. While attendance at all sessions is not required, the sessions build on each other, so we recommend that you attend as many as possible to get the most value from them. Information about the complete series can be found here: http://www.oscer.ou.edu/education.php.


    Please register with MSI for each session you plan to attend. We also encourage you to register with OSCER by sending an email to hneeman@ou.edu. Knowing how many people are participating may enable them to present more workshops in the future.


  • Tue Feb 12, 1:00 pm - 4:00 pm

    This is a two-day workshop. Attendance is required on both February 12 and 13 (1:00 to 4:00 both days).


    ONLINE PARTICIPATION:

    People unable to attend the tutorial SNP Variant Detection Applied Tutorial in person in 575 Walter will be able to view the tutorial online through UMConnect. Please register for the tutorial as usual.


    Registered users will receive an email with the meeting information within 24 hours of the workshop start date. Please visit http://www.oit.umn.edu/umconnect/ to ensure that your system meets the minimum requirements necessary to participate in this webinar.


    IMPORTANT NOTE: To ensure completion of the computational exercises that are part of the tutorial only in-person attendees will be able to participate in the hands-on activities.


    VIRTUAL ATTENDEES WILL ONLY BE ABLE TO VIEW THE TUTORIAL.


    For our virtual attendees who may have existing MSI and Galaxy accounts, we ask them to observe the presenters’ request to not run the hands-on portion of the tutorial. Systems will be monitored and non-complying processes will be terminated.


    The tutorial will be recorded with high-definition video and audio for later viewing along with the stepwise tutorial instructions (PDF file). Please refer to our website to download the materials (https://www.msi.umn.edu/tutorial-materials). We encourage researchers who are on the waiting list or not able to attend to review this material and go through the tutorial at their leisure. RISS analysts will be able to answer questions from users with MSI research accounts; please send questions to help@msi.umn.edu (subject line: RISS tutorial).


    All registered participants will be notified before the tutorial of any changes.


    Participants are expected to be familiar with next-generation sequence data. Participants do not need previous experience with the GATK or Galaxy.


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