Minnesota Supercomputing Institute
With regards to the safety measures put in place by the university to mitigate the risks of the COVID-19 virus, at this time all MSI systems will remain operational and can be accessed remotely as usual. The only planned outages concern our in-person Helpdesk and tutorials. More information, as well as alternative remote support options, can be found at MSI COVID-19 Continuity Plan
*This sessions is day 1 of a 2 day series. If you're interested in also intending the day 2 workshop, please sign up here
Introduction to common techniques for the analysis and quantitation of proteomics mass spectrometry ("mass spec") data. This workshop will focus on how to build your own analysis workflow – both quantitative and non-quantitative – using the openMS tools and the KNIME platform. Different search engines will be demonstrated along with their relevant parameters and how to incorporate their results. The first day will be demonstration-driven, building a workflow from scratch in the course, while the second day will be an opportunity for attendees to work on their own data or do additional explorations of provided data sets.
Working files used during the tutorial can be found here.