Tutorials List

Displaying 1 - 30 of 50
Tutorial Name Summary Next Date Offeredsort descending
Introduction to Minnesota Supercomputing Institute (MSI) (Remote) 09/29/2022
Introduction to Minnesota Supercomputing Institute (MSI) (On Site)

This tutorial is geared to new MSI users and will provide a highlevel introduction to the facilities and computational resources at MSI.

09/29/2022
Introduction to Linux (In Person)

This tutorial will provide an introduction to the Linux operating system, with particular attention paid to working from the command line

10/04/2022
Introduction to Linux (Remote) 10/04/2022
Job Submission and Scheduling at MSI (Remote) 10/06/2022
Job Submission and Scheduling at MSI (In Person)

This tutorial will introduce users to MSI supercomputers, and provide an overview of how to submit calculations to the job schedulers

10/06/2022
Interactive Computing at MSI (On Site)

This two part tutorial will introduce you to the concept of interactive high performance computing, and provide attendees hands-on experience running interactive parallel jobs on the Mesabi HPC 

10/11/2022
Interactive Computing at MSI (Remote) 10/11/2022
Programming with Python (On Site)

Introduction to fundamentals of programming using the python language.

10/13/2022
Programming with Python (Remote) 10/13/2022
Data Storage Systems and Data Analysis Workflows for Research (Remote) 10/20/2022
Data Storage Systems and Data Analysis Workflows for Research (On Site)

In this tutorial you will learn about the data storage systems available for academic research at the University of Minnesota

10/20/2022
Python for Scientific Computing (Remote) 10/27/2022
Python for Scientific Computing (On Site)

This session includes efficient data processing with NumPy and Scipy, data visualization, and techniques for using python to drive parallel supercomputing tasks.

10/27/2022
Software Installation and Management at MSI (Remote) 11/01/2022
Software Installation and Management at MSI (On Site)

This workshop covers the basics of how to create and maintain your own software environments at MSI.

11/01/2022
RNA-Seq Analysis (On Site)

This tutorial covers the basics of differential expression analysis and touches on other RNA-seq topics such as transcriptome assembly.

11/08/2022
RNA-Seq Analysis (Remote and On-Site) 11/08/2022
Parallel Computing On Agate (On Site)

This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution.

11/09/2022
Parallel Computing On Agate (Remote) 11/09/2022
Intro to Single-cell Genomics (Remote) 11/15/2022
Intro to Single-cell Genomics (On Site)

This tutorial is a lecture that covers basic experimental design principles as they pertain to single cell genomics.

11/15/2022
Introduction to Compiling and Profiling at MSI (On Site)

This tutorial will help users learn the basics of compiling and debugging their code on MSI systems

11/17/2022
Introduction to Compiling and Profiling at MSI (Remote) 11/17/2022
Single Cell Genomics and its application in Neuroscience research

This tutorial is a lecture that covers basic principles as they pertain to single cell genomics. We will cover basic experimental design and data quality control for analyzing single cell data, followed by new developments in sequencing technologies, such as single nucleus sequencing, Patch sequencing, spatial genomics and so on. The material will also cover how these new technologies could contribute to new discoveries in Neuroscience researches.

12/06/2022
Intro to Pathway Analysis (remote)

Agenda:

   11:00AM to 12:00PM: Pathway Analysis Overview

   12:00PM to 1:00PM: Break
   1:00PM to 2:00 PM: Command Line Refresher / OpenOnDemand intro
   2:00PM to 2:30PM: Running and Interpreting Pathway Analyses

12/08/2022
Intro to Pathway Analysis (in person)

Agenda:

   11:00AM to 12:00PM: Pathway Analysis Overview

   12:00PM to 1:00PM: Break
   1:00PM to 2:00 PM: Command Line Refresher / OpenOnDemand intro
   2:00PM to 2:30PM: Running and Interpreting Pathway Analyses

 

12/08/2022
RNA Seq Analysis @ UMN Duluth

(UMN Duluth on site session), The RNA-Seq analysis tutorials includes a lecture and a hands-on guided tutorial

N/A
Parallel Computing Overview

This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution

N/A
July 2020: Version Control with Git

This tutorial will cover the basics of version control using git and github

N/A

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