Tutorials List

This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes.

This Hands-on tutorial will cover a standard RNA-Seq analysis using RIS pipeline CHURP 

This two part tutorial will introduce you to the concept of interactive high performance computing, and provide attendees hands-on experience running interactive parallel jobs on the Mesabi HPC 

This tutorial is a lecture that covers basic experimental design principles as they pertain to single cell genomics.

This tutorial will help users learn the basics of compiling and debugging their code on MSI systems

In this tutorial, MSI and Nvidia instructors will walk through an interactive exercise running programs such as Caffe and Tensorflow.

Agenda:

   11:00 a.m. - 12:00 p.m.: Pathway Analysis Overview

   12:00 - 1:00 p.m.: Break

   1:00 - 2:00 p.m.: Command Line Refresher / OpenOnDemand intro

   2:00 - 2:30 p.m.: Running and Interpreting Pathway Analyses

This tutorial will introduce users to MSI supercomputers, and provide an overview of how to submit calculations to the job schedulers

Introduction to fundamentals of programming using the python language

This tutorial provides an introduction on how to write a parallel program using MPI and will help researchers write better and portable parallel codes for distributed-memory Linux clusters