Tutorials List

Displaying 1 - 30 of 50
Tutorial Namesort descending Summary Next Date Offered
Advanced Python (On Site)

This session includes efficient data processing with NumPy and Scipy, data visualization, and techniques for using Python to drive parallel supercomputing tasks.

03/28/2023
Advanced Python (Remote) 03/28/2023
Basics of RNA-Seq Data Analysis - Lecture

This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes.

N/A
Data Storage Systems and Data Analysis Workflows for Research (On Site)

In this tutorial you will learn about the data storage systems available for academic research at the University of Minnesota

03/02/2023
Data Storage Systems and Data Analysis Workflows for Research (Remote) 03/02/2023
Getting started with XSEDE resources

This hands-on tutorial will introduce MSI researchers to multiple XSEDE resources.

N/A
Hands-on tutorial on RNA-Seq analysis using CHURP

This Hands-on tutorial will cover a standard RNA-Seq analysis using RIS pipeline CHURP 

N/A
Interacting with dbGaP data on Stratus

This tutorial introduces Stratus to users who wish to process dbGaP data at MSI

N/A
Interactive Computing at MSI (On Site)

This two part tutorial will introduce you to the concept of interactive high performance computing, and provide attendees hands-on experience running interactive parallel jobs on the Mesabi HPC 

02/16/2023
Interactive Computing at MSI (Remote) 02/16/2023
Intro to Single-cell Genomics (On Site)

This tutorial is a lecture that covers basic experimental design principles as they pertain to single cell genomics.

03/30/2023
Intro to Single-cell Genomics (Remote) 03/30/2023
Introduction to Compiling and Profiling at MSI (On Site)

This tutorial will help users learn the basics of compiling and debugging their code on MSI systems

03/23/2023
Introduction to Compiling and Profiling at MSI (Remote) 03/23/2023
Introduction to Deep Learning with Caffe and Tensorflow

In this tutorial, MSI and Nvidia instructors will walk through an interactive exercise running programs such as Caffe and Tensorflow.

N/A
Introduction to Linux (In Person)

This tutorial will provide an introduction to the Linux operating system, with particular attention paid to working from the command line

02/07/2023
Introduction to Linux (Remote) 02/07/2023
Introduction to Minnesota Supercomputing Institute (MSI) (On Site)

This tutorial is geared to new MSI users and will provide a highlevel introduction to the facilities and computational resources at MSI.

01/31/2023
Introduction to Minnesota Supercomputing Institute (MSI) (Remote) 01/31/2023
Intro to Pathway Analysis (remote)

Agenda:

   11:00 a.m. - 12:00 p.m.: Pathway Analysis Overview

   12:00 - 1:00 p.m.: Break

   1:00 - 2:00 p.m.: Command Line Refresher / OpenOnDemand intro

   2:00 - 2:30 p.m.: Running and Interpreting Pathway Analyses

04/18/2023
Intro to Pathway Analysis (in person)

Agenda:

   11:00 a.m. - 12:00 p.m.: Pathway Analysis Overview

   12:00 - 1:00 p.m.: Break

   1:00 - 2:00 p.m.: Command Line Refresher / OpenOnDemand intro

   2:00 - 2:30 p.m.: Running and Interpreting Pathway Analyses

 

 

04/18/2023
Introduction to Slurm Workload Manager

An overview to using the Slurm Workload Manager at MSI

N/A
Job Submission and Scheduling at MSI (In Person)

This tutorial will introduce users to MSI supercomputers, and provide an overview of how to submit calculations to the job schedulers

02/14/2023
Job Submission and Scheduling at MSI (Remote) 02/14/2023
July 2020: Programming with Python

Introduction to fundamentals of programming using the python language

N/A
July 2020: Version Control with Git

This tutorial will cover the basics of version control using git and github

N/A
MPI

This tutorial provides an introduction on how to write a parallel program using MPI and will help researchers write better and portable parallel codes for distributed-memory Linux clusters

N/A
Parallel Computing On Agate (On Site)

This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution.

03/16/2023
Parallel Computing On Agate (Remote) 03/16/2023
Parallel Computing Overview

This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution

N/A

Pages