Tutorials List

Displaying 1 - 30 of 31
Tutorial Namesort descending Summary Next Date Offered
Basics of RNA-Seq Data Analysis - Lecture

This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes.

N/A
Compiling and Debugging at MSI

This tutorial will help users learn the basics of compiling and debugging their code on MSI systems

02/24/2022
Data Storage Systems and Data Analysis Workflows for Research

In this tutorial you will learn about the data storage systems available for academic research at the University of Minnesota

02/17/2022
Getting started with XSEDE resources

This hands-on tutorial will introduce MSI researchers to multiple XSEDE resources.

N/A
Hands-on tutorial on RNA-Seq analysis using CHURP

This Hands-on tutorial will cover a standard RNA-Seq analysis using RIS pipeline CHURP 

N/A
Interacting with dbGaP data on Stratus

This tutorial introduces Stratus to users who wish to process dbGaP data at MSI

N/A
Interactive Computing at MSI

This two part tutorial will introduce you to the concept of interactive high performance computing, and provide attendees hands-on experience running interactive parallel jobs on the Mesabi HPC 

02/15/2022
Introduction to Deep Learning with Caffe and Tensorflow

In this tutorial, MSI and Nvidia instructors will walk through an interactive exercise running programs such as Caffe and Tensorflow.

N/A
Introduction to Linux

This tutorial will provide an introduction to the Linux operating system, with particular attention paid to working from the command line

02/03/2022
Introduction to Minnesota Supercomputing Institute (MSI)

This tutorial is geared to new MSI users and will provide a highlevel introduction to the facilities and computational resources at MSI.

02/01/2022
Introduction to Slurm Workload Manager

An overview to using the Slurm Workload Manager at MSI

N/A
Job Submission and Scheduling at MSI

This tutorial will introduce users to MSI supercomputers, and provide an overview of how to submit calculations to the job schedulers

02/10/2022
July 2020: Programming with Python

Introduction to fundamentals of programming using the python language

N/A
July 2020: Version Control with Git

This tutorial will cover the basics of version control using git and github

N/A
MPI

This tutorial provides an introduction on how to write a parallel program using MPI and will help researchers write better and portable parallel codes for distributed-memory Linux clusters

N/A
Parallel Computing Overview

This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution

N/A
Programming with Python

Introduction to fundamentals of programming using the python language.

02/08/2022
Python for Scientific Computing

This session includes efficient data processing with NumPy and Scipy, data visualization, and techniques for using python to drive parallel supercomputing tasks.

03/01/2022
Q&A: Compiling and Debugging at MSI

Q&A session to learn the basics of compiling and debugging their code on MSI systems

N/A
Q&A: Data Storage Systems and Data Analysis Workflows for Research

Q&A session about the data storage systems available for academic research at the University of Minnesota.

N/A
Q&A: Interactive Computing at MSI

Q&A session introducing you to the concept of interactive high performance computing, as distinct from batch computing

N/A
Q&A: Introduction to Linux

Q&A session covering an introduction to the Linux operating system

N/A
Q&A: Introduction to MSI

Q&A session geared to new MSI users

N/A
Q&A: Job Submission and Scheduling at MSI

Q&A session about using Slurm Workload Manager at MSI

N/A
Q&A: MPI

Q&A session on how to write a parallel program using MPI and will help researchers write better and portable parallel codes for distributed-memory Linux clusters.

N/A
Q&A: Parallel Computing Overview

Q&A session about the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution.

N/A
Q&A: Programming with Python

Q&A session going over the fundamentals of programming using the python language

N/A
Q&A: Singularity and Containers

Q&A session introducing users to containers and provide hands-on experience running both interactively and within batch scheduled jobs.

N/A
RNA-Seq Analysis

This tutorial covers the basics of differential expression analysis and touches on other RNA-seq topics such as transcriptome assembly.

03/03/2022
Singularity & Containers

This course will introduce users to containers and provide hands-on experience running both interactively and within batch scheduled jobs.

N/A

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