Tutorial Name![]() |
Summary | Next Date Offered |
---|---|---|
Advanced Python (On Site) |
This session includes efficient data processing with NumPy and Scipy, data visualization, and techniques for using Python to drive parallel supercomputing tasks. |
03/28/2023 |
Advanced Python (Remote) | 03/28/2023 | |
Basics of RNA-Seq Data Analysis - Lecture |
This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes. |
N/A |
Data Storage Systems and Data Analysis Workflows for Research (On Site) |
In this tutorial you will learn about the data storage systems available for academic research at the University of Minnesota |
03/02/2023 |
Data Storage Systems and Data Analysis Workflows for Research (Remote) | 03/02/2023 | |
Getting started with XSEDE resources |
This hands-on tutorial will introduce MSI researchers to multiple XSEDE resources. |
N/A |
Hands-on tutorial on RNA-Seq analysis using CHURP |
This Hands-on tutorial will cover a standard RNA-Seq analysis using RIS pipeline CHURP |
N/A |
Interacting with dbGaP data on Stratus |
This tutorial introduces Stratus to users who wish to process dbGaP data at MSI |
N/A |
Interactive Computing at MSI (On Site) |
This two part tutorial will introduce you to the concept of interactive high performance computing, and provide attendees hands-on experience running interactive parallel jobs on the Mesabi HPC |
02/16/2023 |
Interactive Computing at MSI (Remote) | 02/16/2023 | |
Intro to Single-cell Genomics (On Site) |
This tutorial is a lecture that covers basic experimental design principles as they pertain to single cell genomics. |
03/30/2023 |
Intro to Single-cell Genomics (Remote) | 03/30/2023 | |
Introduction to Compiling and Profiling at MSI (On Site) |
This tutorial will help users learn the basics of compiling and debugging their code on MSI systems |
03/23/2023 |
Introduction to Compiling and Profiling at MSI (Remote) | 03/23/2023 | |
Introduction to Deep Learning with Caffe and Tensorflow |
In this tutorial, MSI and Nvidia instructors will walk through an interactive exercise running programs such as Caffe and Tensorflow. |
N/A |
Introduction to Linux (In Person) |
This tutorial will provide an introduction to the Linux operating system, with particular attention paid to working from the command line |
02/07/2023 |
Introduction to Linux (Remote) | 02/07/2023 | |
Introduction to Minnesota Supercomputing Institute (MSI) (On Site) |
This tutorial is geared to new MSI users and will provide a highlevel introduction to the facilities and computational resources at MSI. |
01/31/2023 |
Introduction to Minnesota Supercomputing Institute (MSI) (Remote) | 01/31/2023 | |
Intro to Pathway Analysis (remote) |
Agenda: 11:00 a.m. - 12:00 p.m.: Pathway Analysis Overview 12:00 - 1:00 p.m.: Break 1:00 - 2:00 p.m.: Command Line Refresher / OpenOnDemand intro 2:00 - 2:30 p.m.: Running and Interpreting Pathway Analyses |
04/18/2023 |
Intro to Pathway Analysis (in person) |
Agenda: 11:00 a.m. - 12:00 p.m.: Pathway Analysis Overview 12:00 - 1:00 p.m.: Break 1:00 - 2:00 p.m.: Command Line Refresher / OpenOnDemand intro 2:00 - 2:30 p.m.: Running and Interpreting Pathway Analyses
|
04/18/2023 |
Introduction to Slurm Workload Manager |
An overview to using the Slurm Workload Manager at MSI |
N/A |
Job Submission and Scheduling at MSI (In Person) |
This tutorial will introduce users to MSI supercomputers, and provide an overview of how to submit calculations to the job schedulers |
02/14/2023 |
Job Submission and Scheduling at MSI (Remote) | 02/14/2023 | |
July 2020: Programming with Python |
Introduction to fundamentals of programming using the python language |
N/A |
July 2020: Version Control with Git |
This tutorial will cover the basics of version control using git and github |
N/A |
MPI |
This tutorial provides an introduction on how to write a parallel program using MPI and will help researchers write better and portable parallel codes for distributed-memory Linux clusters |
N/A |
Parallel Computing On Agate (On Site) |
This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution. |
03/16/2023 |
Parallel Computing On Agate (Remote) | 03/16/2023 | |
Parallel Computing Overview |
This tutorial will help users learn the basics of parallel computation methods, including strategies for collecting calculations together for parallel execution |
N/A |
Tutorials List
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