Tutorials List

Displaying 1 - 10 of 10
Tutorial Name Summary Next Date Offeredsort descending
Rna-Seq Analysis

This tutorial covers the basics of differential expression analysis and touches on other RNA-seq topics such as transcriptome assembly.

Quality Control of Illumina Data with Galaxy

This hands-on tutorial will help a new user understand how to use the the Galaxy platform to analyze NGS data


This tutorial covers an overview of the new enhancements to Abacus as well as a brief introduction to Isight, Tosca, and fe-safe.

Analyze ChIP-Seq Data at the Command Line

This tutorial focuses on command line tools in the Galaxy enviornment to analyze ChiP-Seq data, automate mapping and peak calling, and edit and run scripts.  

PacBio Sequencing - Lecture

This lecture will cover the special capabilities and use cases of PacBio sequencing as well as the basics of data analysis.

Analysis of PacBio Sequencing Data Using SMRT Portal

This hands-on tutorial will cover installation and use of the SMRT portal at MSI to analyze PacBio sequencing data.

Basics of RNA-Seq Data Analysis - Lecture

This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes.

Quality Control of Illumina Data at the Command Line

This hands-on tutorial will introduce new bioinformaticitions to the skills needed to start to build more complex analysis pipelines. 

Digital Gene Expression (DGE) Analysis Using Galaxy, Human Data

This is a practical, hands-on tutorial designed to give participants experience with RNA-Seq data analysis using Tophat, Cufflinks, and CummRbund in Galaxy.

Analyzing ChIP-Seq Data using Galaxy

This practical, hands-on tutorial is designed to give participants experience with ChIP-Seq data analysis using the Galaxy platform.