Tutorials List

Displaying 1 - 10 of 10
Tutorial Name Summary Next Date Offeredsort descending
Quality Control of Illumina Data with Galaxy

This hands-on tutorial will help a new user understand how to use the the Galaxy platform to analyze NGS data

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Rna-Seq Analysis

This tutorial covers the basics of differential expression analysis and touches on other RNA-seq topics such as transcriptome assembly.

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Abaqus

This tutorial covers an overview of the new enhancements to Abacus as well as a brief introduction to Isight, Tosca, and fe-safe.

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Analyze ChIP-Seq Data at the Command Line

This tutorial focuses on command line tools in the Galaxy enviornment to analyze ChiP-Seq data, automate mapping and peak calling, and edit and run scripts.  

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PacBio Sequencing - Lecture

This lecture will cover the special capabilities and use cases of PacBio sequencing as well as the basics of data analysis.

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Analysis of PacBio Sequencing Data Using SMRT Portal

This hands-on tutorial will cover installation and use of the SMRT portal at MSI to analyze PacBio sequencing data.

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Basics of RNA-Seq Data Analysis - Lecture

This lecture will cover the basics of RNA-Seq experimental design and data quality assessment, followed by an overview of data analysis for the detection of differentally expressed genes.

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Quality Control of Illumina Data at the Command Line

This hands-on tutorial will introduce new bioinformaticitions to the skills needed to start to build more complex analysis pipelines. 

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Digital Gene Expression (DGE) Analysis Using Galaxy, Human Data

This is a practical, hands-on tutorial designed to give participants experience with RNA-Seq data analysis using Tophat, Cufflinks, and CummRbund in Galaxy.

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Analyzing ChIP-Seq Data using Galaxy

This practical, hands-on tutorial is designed to give participants experience with ChIP-Seq data analysis using the Galaxy platform. 

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